ChIN简介页:VMD (分子可视化软件)
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VMD (分子可视化软件)

【URL】 http://www.ks.uiuc.edu/Research/vmd/

【作者】 Biophysics Group,University of Illinois at Urbana-Champaign (UIUC)

【语言版本】 English

【收费情况】  免费

【用途】 VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting. VMD supports computers running MacOS-X, Unix, or Windows, is distributed free of charge, and includes source code.

VMD is designed for the visualization and analysis of biological systems such as proteins, nucleic acids, lipid bilayer assemblies, etc. It may be used to view more general molecules, as VMD can read standard Protein Data Bank (PDB) files and display the contained structure. VMD provides a wide variety of methods for rendering and coloring a molecule: simple points and lines, CPK spheres and cylinders, licorice bonds, backbone tubes and ribbons, cartoon drawings, and others. VMD can be used to animate and analyze the trajectory of a molecular dynamics (MD) simulation. In particular, VMD can act as a graphical front end for an external MD program by displaying and animating a molecule undergoing simulation on a remote computer. VMD uses OpenGL to provide high performance 3-D molecular graphics

【相关链接】
  RasMol:3D分子结构显示程序
  PDB文件显示程序KineMage
  美国伊利诺依大学:理论生物物理学研究组
  JMV (Java分子可视化工具)
  ProtoMol (分子动力学并行计算软件)
  UIUC的基于GPU的分子模拟应用


Summary by 王小伟 on 2003-07-29

Last updated by 李晓霞 on 2003-08-04

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